PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA45638.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NF-YC

Protein Properties

Length: 235aa MW: 26463.9 Da PI: 5.2526

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA45638.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	152.7	6.7e-48	80	183	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql+ fw++q i +tdfknh+lPlarikki+kadedvkmi+ae+Pvl+s+ace+filelt rsw ++e++krrtl++sdia+a+++ ++fdflvdiv PKA45638.1 80 QLHFFWTSQlqeIRANTDFKNHNLPLARIKKIMKADEDVKMIAAETPVLFSRACEMFILELTHRSWGQTEHSKRRTLQRSDIASAIAKNQVFDFLVDIV 178 7999*997777889********************************************************************************* PP NF-YC 97 prdel 101 p +e+ PKA45638.1 179 PVEET 183 *9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MEIGEQGQGN VDEAAQPQQP IMDPAQFPLI SGPLQTNHMT GNSSSLLVGG LVPSFPFPIT 60 PSQLPQQHIH HQQLPQSDQQ LHFFWTSQLQ EIRANTDFKN HNLPLARIKK IMKADEDVKM 120 IAAETPVLFS RACEMFILEL THRSWGQTEH SKRRTLQRSD IASAIAKNQV FDFLVDIVPV 180 EETKEAGVPT MPVGEGLNDS ISYFYDPSKF GSLMMDMRNP EVDCQGLTYT HQHQD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	153	159	RRTLQRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	1e-51	NF-YC family protein