PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA45675.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 331aa MW: 36597.6 Da PI: 10.5292

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA45675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	31.2	4.5e-10	273	292	3	22
-SS-EEEEEEE--TT-SS-E CS WRKY 3 DgynWrKYGqKevkgsefpr 22 D+y+WrKYGqK+++gs++pr PKA45675.1 273 DEYSWRKYGQKPIRGSPHPR 292 9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MDEVEGANKA AIESCHRVLC LLESRESQDG VRCRRRVVAE TGEAVSRLRK LVSLLSNGVG 60 HARVRRGKLS LLQAPSFSSK NFVLDAALEA DTSFFSGLFP RTVDVDRRIL LERNLAQETN 120 SASKNSLQLA TQFQYLQKQQ QQQKNAFQLQ QHINFQAETL RTGNDCSINL KFDTPSCSQI 180 LSSSNPSFFS SLSVDGCGSM SRLDGKAFQS VGGSQPSDSG NPTSKRCARR GTVGNGKCAS 240 TGRCHCLKKR KLRVKRSIKV PAISNKLADI PPDEYSWRKY GQKPIRGSPH PRFNSQVVSW 300 TFVILILVCQ NQNFSPLLNF TNGDLIIGTA R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04670.2	2e-39	WRKY family protein