PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA45763.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family HD-ZIP
Protein Properties Length: 847aa    MW: 92870.9 Da    PI: 6.3708
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA45763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.74.2e-182077457
                -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  PKA45763.1 20 YVRYTPEQVEALERVYGECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 77
                6789****************************************************97 PP
2START1701.6e-531683752204
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W +++++ ++l vi  g  g ++l+++++
  PKA45763.1 168 IAEETLAEFLAKATGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPT-KVAEILKDRASWYRDCRSLDVLTVIPAGngGNIELIYMQT 265
                 68999*****************************************************.8888888888*****************999********** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l++ Rdf+++Ry+ +l++g++v++++S+++ +  p     +++vRae+lp g+li+p+++g+s +++v+hvdl++++++++lr+l++s  + ++
  PKA45763.1 266 YAPTTLASaRDFWTLRYTTCLEDGSLVVCERSLTPSTGGPAgppAANFVRAEMLPGGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESAKFLAQ 364
                 ***********************************999998888******************************************************* PP

                 HHHHHHTXXXX CS
       START 194 ktwvatlqrqc 204
                 k++ a+l++ +
  PKA45763.1 365 KMTIAALRHIR 375
                 ******99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 847 aa     Download sequence    
MALVVSGKEA GKQQMDVGKY VRYTPEQVEA LERVYGECPK PSSLRRQQLI RECPILSNIE  60
PKQIKVWFQN RRCREKQRKE ASRLQTVNRK LTAMNKLLME ENDRLQKQVS QLVYENGFMR  120
QQIHSASVTT TDNSCESVVT SSRNHQQQNP TPQHPQRDAS NPAGLLAIAE ETLAEFLAKA  180
TGTAVDWVQM VGMKPGPDSI GIIAVSHNCS GVAARACGLV SLEPTKVAEI LKDRASWYRD  240
CRSLDVLTVI PAGNGGNIEL IYMQTYAPTT LASARDFWTL RYTTCLEDGS LVVCERSLTP  300
STGGPAGPPA ANFVRAEMLP GGYLIRPCEG GGSMIHIVDH VDLDAWSVPE VLRPLYESAK  360
FLAQKMTIAA LRHIRQIAQE SNGEINFGGG RQPAVLRTFS QRLSRGFNDA INGFPDDGWS  420
LLGNDGVEDV TVTINLSPNK LLGSHSSSAI FSSMRGGILC AKASMLLQNV PPALLVRFLR  480
EHRSEWADSG VDAYCSAPLR ASPYSDPCMR ITNGFMGGHV IIPLAQTMES EEALEVVRME  540
SHGFGPEDVL SRDMYLLQMC NGIDESATGA CAQLVFAPID ESFADDALLL PSGFRVIPLD  600
AKTDSPATTR TLDLASALEV GGGLSRTAND NGSNSYNSRS VLTIAFQFTF ENHLRENVAA  660
MARQYVRSVV ASVQRVAMAI SPSRLGTQLG TKQVPGSPEA HTLAQWIFRS YRFYTGIELL  720
RSESHQSGES LLKLMWHHSD AILCCSLKAS PLFTFANQAG LDMLETTLVA LQDIALEKIL  780
DDPGRKVFCS EFPKLMQQGF AYLPGGVCLS SMGRPVSYEQ AVAWKVLDGE DDSPHCLAFI  840
FLSWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein