PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA45860.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 164aa    MW: 18568.2 Da    PI: 10.1406
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA45860.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.7e-051941123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ F++   L  H+++H
  PKA45860.1 19 YSCSFCKREFRSAQALGGHMNVH 41
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MEKYGEARCK GFSWPPRCYS CSFCKREFRS AQALGGHMNV HRRDRARLRQ SPPWEHRLPS  60
PSNPNPNPNP RPLPNLNLPP PSPVFYTIPS LQLSSLAPIS SSSSSNSKEE GLRKAKATKA  120
WRNFMDEGGR KEGLVEIMRK KMEVKSCGEL DGDLDLELRL GYIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.12e-22C2H2 family protein