PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA45924.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 376aa    MW: 40994.3 Da    PI: 10.8331
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA45924.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.74.8e-12198240246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +++ Ed+ +  ++   G++ W+ Ia++++ gRt++++k++w++
       PKA45924.1 198 GEFSESEDKVICSLFSTIGSR-WSIIASHLP-GRTDNDIKNYWNT 240
                      789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MHVSLWAVTD VRNHPLSLLP ASLSISLLPI VPHGRCRRTP VATRRVLPTG SRTTAGGSCR  60
HHPCTGIERR ERHRRPCDAL ADADESRACV GIRRRERRPL SPPDPRSRAM AVPPVGGSAG  120
IARPSWVAHA ARPRLGPCGG SGGERERGAG DADVTRRRPR GVASPVRGEE QKRWAGLLAA  180
IRPTLRWLNY LRPNIKHGEF SESEDKVICS LFSTIGSRWS IIASHLPGRT DNDIKNYWNT  240
KLKKKILGLS SSKKNPSIHH QNHQQFIFPS LPAPSLLSNH FLSSLPSSFR TLPPISPEAF  300
SSSSSSLSSS SPALLAFNGD QQNCSTSNSS DLSFEGFFFN GSNGFSELGG FPNPPLEDDS  360
AYDEIKQLLL SINGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23000.12e-28MYB family protein