PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA46063.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

ARR-B

Protein Properties

Length: 683aa MW: 73658.2 Da PI: 6.5055

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA46063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.3	1.7e-28	231	284	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl PKA46063.1 231 KPRVVWSVELHQQFVNAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 284 79*****************.******************************8 PP
2	Myb_DNA-binding	41.3	3.6e-13	233	283	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v+av+qlG + +k+I + m+ g+t++++ s++qk++ PKA46063.1 233 RVVWSVELHQQFVNAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 283 678**********************************************97 PP
3	Response_reg	78.7	2e-26	46	154	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++l+ +l k +y +v++++++++al ll+e++ +D+++ D+ mp+mdG++ll+ e++lp+i+++a g + + + +k Ga PKA46063.1 46 VLVVDDDVTCLKILEHMLHKCRY-RVTTCSQATKALSLLRERKggFDVVISDVHMPDMDGFKLLELVGL-EMDLPVIMMSADGRTSAVMRGIKHGAC 140 89*******************.***********999999***************87754.558******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + PKA46063.1 141 DYLIKPVRIEELKN 154 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MAAMQKLAAP SASTGSSYGS CRADATDAVS AAPGAAQEQF PVGMRVLVVD DDVTCLKILE 60 HMLHKCRYRV TTCSQATKAL SLLRERKGGF DVVISDVHMP DMDGFKLLEL VGLEMDLPVI 120 MMSADGRTSA VMRGIKHGAC DYLIKPVRIE ELKNIWQHVI RKKWNENKDV EHSGSLEDSD 180 CHRRVADDAE YASSVNNGLD SSWKTQKKKR DTKEEEDEGE LENDDPSTSK KPRVVWSVEL 240 HQQFVNAVNQ LGIDKAVPKR ILELMNVPGL TRENVASHLQ KFRLYLKRLS GVAQHQSALP 300 NPFCSHVETN AKVGSLGRLD FQSLAASGQI PPQTLAALHA ELLGRPSGSL LLPAVDQPVV 360 LQTSSQGSKC LPVEREVGFC QPLFKCQSET SKQFPPTEIN VQEISSTLSS WPSTRPSTQL 420 GGLSDTQNSN LLMQMLQKQQ KQQPLYPVVS DSHNAINVQP SCLVVPSQLP SCLNQNAMVA 480 SFQLGSNNVL ANSNSSLDSG ISYDYGILSP QTNNVPLGMG QVSDGHFKST GPLNSCISPA 540 SVPTSVASSS IYAGHGAGWR SPNSDLNIGS ASRLPGHLPN VSIQSSDVNL GISVSQGQVK 600 NLGFVGKGTC LPSRFAVDDI ESPTNDQSNV KGSLFDVVNK VKQELNLDFL DGSQVGSSVT 660 NFPSSDFMGV LSKDSQAGCF LSS

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MAAMQKLAAP SASTGSSYGS CRADATDAVS AAPGAAQEQF PVGMRVLVVD DDVTCLKILE  60
HMLHKCRYRV TTCSQATKAL SLLRERKGGF DVVISDVHMP DMDGFKLLEL VGLEMDLPVI  120
MMSADGRTSA VMRGIKHGAC DYLIKPVRIE ELKNIWQHVI RKKWNENKDV EHSGSLEDSD  180
CHRRVADDAE YASSVNNGLD SSWKTQKKKR DTKEEEDEGE LENDDPSTSK KPRVVWSVEL  240
HQQFVNAVNQ LGIDKAVPKR ILELMNVPGL TRENVASHLQ KFRLYLKRLS GVAQHQSALP  300
NPFCSHVETN AKVGSLGRLD FQSLAASGQI PPQTLAALHA ELLGRPSGSL LLPAVDQPVV  360
LQTSSQGSKC LPVEREVGFC QPLFKCQSET SKQFPPTEIN VQEISSTLSS WPSTRPSTQL  420
GGLSDTQNSN LLMQMLQKQQ KQQPLYPVVS DSHNAINVQP SCLVVPSQLP SCLNQNAMVA  480
SFQLGSNNVL ANSNSSLDSG ISYDYGILSP QTNNVPLGMG QVSDGHFKST GPLNSCISPA  540
SVPTSVASSS IYAGHGAGWR SPNSDLNIGS ASRLPGHLPN VSIQSSDVNL GISVSQGQVK  600
NLGFVGKGTC LPSRFAVDDI ESPTNDQSNV KGSLFDVVNK VKQELNLDFL DGSQVGSSVT  660
NFPSSDFMGV LSKDSQAGCF LSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-118	ARR-B family protein