PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA46270.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WOX

Protein Properties

Length: 215aa MW: 23862 Da PI: 7.5973

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA46270.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.7	6.3e-21	6	66	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eql +Lee++++ r+p+a+++++++++l +++ ++V++WFqN++a++++ PKA46270.1 6 STRWCPTPEQLMILEEMYRSgLRTPNASQIQQITAHLsyygKIEGKNVFYWFQNHKARDRQ 66 58***************99***********************************996 PP
2	Wus_type_Homeobox	122.4	1.8e-39	5	67	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++tRW+PtpeQ++iLee+y+sGlrtPn+++iq+ita+L+ yGkie+kNVfyWFQN+kaR+rqk PKA46270.1 5 PSTRWCPTPEQLMILEEMYRSGLRTPNASQIQQITAHLSYYGKIEGKNVFYWFQNHKARDRQK 67 589***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MPQAPSTRWC PTPEQLMILE EMYRSGLRTP NASQIQQITA HLSYYGKIEG KNVFYWFQNH 60 KARDRQKLRR RPCRPPPPPP LLSWTDPYLH LHHLDDPSLH LPPHSFLPGP LYHQFHPQLP 120 PQGEWLIQAP SQQGMDLLGK LEAAAAAGEE AALSSGTSSS GNGSDWGTAM EQTISGELPW 180 PQQLKTLELF PTKSTGLKDA CSTSKCSSCA SASTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	9e-39	WOX family protein