PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA46277.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

HSF

Protein Properties

Length: 267aa MW: 30473.4 Da PI: 6.9686

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA46277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.1	8.9e-36	26	118	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y++++d+++++++sw e+ ++f+v+ + efa+++Lp++Fkh+nf+SFvRQLn+YgF+k+ e+ weF+++ F+kg+k+ll++i+ PKA46277.1 26 FLIKTYQLVDDPSTDHIVSWGEDATTFIVWSPPEFARDLLPNFFKHNNFSSFVRQLNTYGFRKIMAER---------WEFANEFFRKGEKHLLSEIH 113 9**************************************************************999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+ks+ PKA46277.1 114 RRKST 118 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MAFMAERRGE EMEVSADSHK SLPAPFLIKT YQLVDDPSTD HIVSWGEDAT TFIVWSPPEF 60 ARDLLPNFFK HNNFSSFVRQ LNTYGFRKIM AERWEFANEF FRKGEKHLLS EIHRRKSTNS 120 QPFHHQFNMI YSPMEDFSSS GIDPPLPPPE DHEANSLMIS ALSEDNERLR RSNSCLLAEL 180 LHLKKLYNDI IFFIQNHVQS PARSCRLVEI DSSNKKSAIS LSELHSSRIN SASVNGGAGK 240 LAEDFDGSVK LFGVSLHGKK RLRSETV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	2e-77	HSF family protein