PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA46376.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 294aa    MW: 32747.8 Da    PI: 8.617
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA46376.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.66.9e-061902271254
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  PKA46376.1 190 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 227
                 677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MLVMSACSKR SSSHVMLIQE DPIPRPLFRQ ELGGSTTMMP STDMSQPFLL ASNSISSSSS  60
SPSSSSYGFS FSMIQNSFYG EQEMPNYQSQ MVSDHQPPWS YRPPPHEQLF NQKQQSTINQ  120
LQFKNNAPFW NASAATMGET SHGSYSSFSS ELPVTSGGPV EEIKKTSGEV SLKKPRMETA  180
QPSLPAFKVR KEKLGDRITA LQQLVSPFGK TDTASVLHEA IEYIKFLHDQ VNALSTPYLK  240
NGHPMQKQQN SEKSNYQDLR SRGLCLVPIA STYPVSSEST SHELWTPAFG RVYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.38e-49bHLH family protein