PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA46455.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family SBP
Protein Properties Length: 207aa    MW: 21788.8 Da    PI: 8.0834
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA46455.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP72.47.9e-23131183153
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETT CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhels 53 
                 +Cq+egC +dl++ak+yhrrhkvCe+hska+ v+++gl+qrfCqqC  ++ ls
  PKA46455.1 131 RCQAEGCGVDLTHAKHYHRRHKVCEFHSKASIVIAAGLSQRFCQQCNFMYFLS 183
                 6*********************************************9777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MMLEYEWANP AAAAAAAAMM LFGEGGVDGG QEIPGVFEHF DGHGLAVAGE FFEPPAQHLN  60
AAALFSTVPA APVNAAACGQ RYGLGLPPPH APAAPARIGL NLGVRTYFSS ASPEEEMGRG  120
RVCRRRTRTA RCQAEGCGVD LTHAKHYHRR HKVCEFHSKA SIVIAAGLSQ RFCQQCNFMY  180
FLSSIKGSVA AGSASPTTIA GEGSLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.15e-29SBP family protein