PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA46457.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GATA
Protein Properties Length: 336aa    MW: 35272.2 Da    PI: 6.778
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA46457.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.76.8e-18227261135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  PKA46457.1 227 CTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRL 261
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MAPEWEIDFG MGMGAEGKGS QAPPTGFYAA AAPPYFCGIP AGAETLRIDD LLDFTNHDLF  60
PSSSCSSVPA DAAHLLPLPE FSAAAGCGQG PSFPDDIYIP SEEAAELEWL SKFVEDSFSD  120
VPYGPYQSMA AETLGKIGAQ HRPEASATGR GARSKRNRAA AVSAGDNGGR QPLASAWSSL  180
TPSSSSTTSS SSSSEFPTPK AKSAGTNVGG RKNASAEAGV DGGVRRCTHC ASEKTPQWRT  240
GPLGPKTLCN ACGVRYKSGR LVPEYRPAAS PTFVLTQHSN SHRKVMELRR QKELLLLRHH  300
ENATSSASFP SVGGGASPFS AAGGRPEMLF HDYEVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.15e-55GATA family protein