PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA46574.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 510aa MW: 57394.8 Da PI: 4.91

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA46574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.8	1.8e-52	12	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 lp GfrF+Ptd+elv++yLk+k++g+ + +vi+e+d++k+ePwdLp k +++e+ ew+fF++rd+ky++g+r+nrat++gyWkatgkd++++s+ PKA46574.1 12 LPLGFRFRPTDQELVNHYLKRKINGRIKSDVSVIPEIDVCKWEPWDLPdKsLIRSEDPEWFFFAPRDRKYQNGRRSNRATEAGYWKATGKDRTIKSRpp 110 699*********************9888799**********96446677888**********************************988 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +g+kktLvfy+grapkge+t+W+mheyr PKA46574.1 111 SPAIIGMKKTLVFYRGRAPKGERTNWIMHEYRT 143 8888*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MAGLEVLLLQ SLPLGFRFRP TDQELVNHYL KRKINGRIKS DVSVIPEIDV CKWEPWDLPD 60 KSLIRSEDPE WFFFAPRDRK YQNGRRSNRA TEAGYWKATG KDRTIKSRPP SPAIIGMKKT 120 LVFYRGRAPK GERTNWIMHE YRTTEPEFES SDQGGYVLCR LFKKPEEKTL NSNAEEAEAM 180 ESSGFSPSKS SLDDSVHGEE ALPGKAYKTI AKLDSPSNSN ITSDIGFQKA DSKFDNSHTL 240 MDSHMPCPSF DDSSVGVISK DEDADRDSIS DFLDAILSNP EDETIPETSQ ALARPAEVLP 300 KVRSIRREHP LDTFSAIDRE DQNLESGDYL DNLLSNFSYS DDFGAQEFLP MDFCHDNDNC 360 ESIQELMSQL GASSGLDVSQ DTCETILDPA REEDNGGIGI KIRDRRLQDF YVGQQGITDQ 420 GHAYRRMRLQ KSLHTVSLAS GHNESAKISS KRDSNADIPE VGCSFHSSQE LLRIFISECH 480 GCLNSIFRLE KTPSLSPTQR LETANSQLHC

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MAGLEVLLLQ SLPLGFRFRP TDQELVNHYL KRKINGRIKS DVSVIPEIDV CKWEPWDLPD  60
KSLIRSEDPE WFFFAPRDRK YQNGRRSNRA TEAGYWKATG KDRTIKSRPP SPAIIGMKKT  120
LVFYRGRAPK GERTNWIMHE YRTTEPEFES SDQGGYVLCR LFKKPEEKTL NSNAEEAEAM  180
ESSGFSPSKS SLDDSVHGEE ALPGKAYKTI AKLDSPSNSN ITSDIGFQKA DSKFDNSHTL  240
MDSHMPCPSF DDSSVGVISK DEDADRDSIS DFLDAILSNP EDETIPETSQ ALARPAEVLP  300
KVRSIRREHP LDTFSAIDRE DQNLESGDYL DNLLSNFSYS DDFGAQEFLP MDFCHDNDNC  360
ESIQELMSQL GASSGLDVSQ DTCETILDPA REEDNGGIGI KIRDRRLQDF YVGQQGITDQ  420
GHAYRRMRLQ KSLHTVSLAS GHNESAKISS KRDSNADIPE VGCSFHSSQE LLRIFISECH  480
GCLNSIFRLE KTPSLSPTQR LETANSQLHC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	5e-87	NAC family protein