PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA46610.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 202aa    MW: 22210.6 Da    PI: 12.0234
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA46610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.82.6e-051281651254
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 RR+++++++  L +++P +     +Kls  + Le++ +Y+  L
  PKA46610.1 128 RRKKVRDRLRVLSKIVPGC-----RKLSAPSLLEETADYVAAL 165
                 9*****************9.....8**************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MIPPHSSAAG DASSVAGDAA GGTKKTKARR QSPPESKWRR GAQQRIYGRR LLEAIRARPA  60
DPRSIKDAAD SALALTAGGQ TRWSRAVLFG RSRRRRTVHL KAGGKIRRRQ LRRKMVAEAS  120
MELPPALRRK KVRDRLRVLS KIVPGCRKLS APSLLEETAD YVAALEMQVK TMRALADALS  180
AATLSERDPV HDPHGRGENL ES
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112131RRKMVAEASMELPPALRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06590.23e-14bHLH family protein