PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA46823.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 293aa    MW: 32029.2 Da    PI: 10.2487
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA46823.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.85.1e-1393138247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE+  ++ + ++lG+g+W+ Iar +   R++ q+ s+ qky
       PKA46823.1  93 NPWTEEEHRMFLLGLQKLGKGDWRGIARNFVVSRSPTQVASHAQKY 138
                      69*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MTRRCSHCNN NGHNSRTCSG RGGGGGSGGG VKLFGVRIAE GAGAMKRSAS MGSLSSSSDP  60
VQDHAAAASG YASDDPGHAS CSSNCRNERK KGNPWTEEEH RMFLLGLQKL GKGDWRGIAR  120
NFVVSRSPTQ VASHAQKYFI RQANASRRKR RSSLFDMVPQ LSNPPPPPET KENILYNSTL  180
LPVLPPIYPT LVQVKFPFWP TNLSIPVREE EMVENHEVYK PTPVLPKDPI NADELVGMSK  240
LCIREVGSGR MEPSALSIKL RETSASRQSA FHLHPSISRP DLNHRSSNVI HAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.12e-61MYB_related family protein