PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA46833.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

HB-other

Protein Properties

Length: 210aa MW: 24190 Da PI: 9.6475

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA46833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.6	1.8e-17	18	76	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+l++++++ s +r++L +++ ++ +q+kvWFqNrR +ek+ PKA46833.1 18 KYVRYTPEQIEALERLYHECPKQSSLRRQQLVRECpilsYIEPKQIKVWFQNRRCREKQ 76 5679*****************************************************97 PP
2	bZIP_1	21.3	6.1e-07	70	114	18	62
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 rr+R++ ++e +L+ +L+a Nk L +e+++l+k+v+ l e PKA46833.1 70 RRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVHE 114 9**************************************998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MMVVASCKEG KGGTDQGKYV RYTPEQIEAL ERLYHECPKQ SSLRRQQLVR ECPILSYIEP 60 KQIKVWFQNR RCREKQRKEA SRLQAVNRKL TAMNKLLMEE NDRLQKQVSH LVHENGYFHQ 120 QARNASLTTP DTSCDSVVTS GQHLLTPQLP PRDASPAGLV SIAEETLAEF LSKATGTAVE 180 WVQMPGMKVW KHLLLWISLK IYGIVYKYYV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52150.3	1e-106	HD-ZIP family protein