PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA46964.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ZF-HD
Protein Properties Length: 219aa    MW: 23964.4 Da    PI: 8.76
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA46964.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer87.81.1e-272170559
  ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                  Y+eCl+NhAa++Gg+a+DGCgEfm+      + +alkCaACgCHRnFHRre + 
   PKA46964.1 21 GYRECLRNHAAAMGGQAYDGCGEFMAG-----KEEALKCAACGCHRNFHRREDSA 70
                 5*************************6.....568****************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MNLSLVPYAE SPALEKSGSR GYRECLRNHA AAMGGQAYDG CGEFMAGKEE ALKCAACGCH  60
RNFHRREDSA SRGQLVLYDR KPTVPTPVPV AFCPPPLPFH QIPPPPPPPP PLLEVGRGGS  120
ETPPRREEGA PMTRKRCRTK FTAEQKEKMR EFADKLGWRI QKHDDEALEE FCIEVGVKRH  180
VLKVWMHNHK NNRSAASVAG VSPGGAGDHS AAAPPTISV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.17e-46ZF-HD family protein