PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA46981.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

MYB_related

Protein Properties

Length: 498aa MW: 53058.4 Da PI: 9.2626

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA46981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.4	1.6e-08	134	178	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrw 44 r+ WT+eEd +l+ av+++G g+W+ + + g Rt+ q+ rw PKA46981.1 134 RKLWTKEEDMKLIAAVQKFGEGNWANVFK--GdfkHERTASQLAQRW 178 567*********************99744..2223556666666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MLWRHLAYGK PLENVEDGTE PLSDESDLEF ELQDTPVPGK EALAEVDFCV KVLLSSGSIG 60 DSNPGVAATV DAPFVTSKVN ESNLGVSSNK QQLTHLYGPT PVATQKKPLH VSVSNKGLDD 120 SGPLNSGFPG KKKRKLWTKE EDMKLIAAVQ KFGEGNWANV FKGDFKHERT ASQLAQRWAI 180 IRKRQTNLNH NGKSRSEEML AAQKALSIAL DMPMKGSLPT IHSGTTQAQK SSSSTVLAEA 240 TTEPLAETRN ASTSTSEALN QNHNKGAPNL SSKLLTSQKR KAFLAKVKKP STSPDPLIKA 300 AAFAAGGRIA TPSTAASLFK AARSKAAVHI QHGGSDSIRK PLGATASSTT ITRPKLSQLR 360 VCSGKAVYHP PSESTKLRSS ELRNPGTSVS CNLVESVEQK RSIIISAADV DELLAEDVGG 420 AEKEAFGISG DQKRKLNEKQ QGIAGQKSMT NQSGEEDMEA DGVMKQNKGS GNAGPHSSAS 480 DCYSNQDAEF EAKGNSED

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MLWRHLAYGK PLENVEDGTE PLSDESDLEF ELQDTPVPGK EALAEVDFCV KVLLSSGSIG  60
DSNPGVAATV DAPFVTSKVN ESNLGVSSNK QQLTHLYGPT PVATQKKPLH VSVSNKGLDD  120
SGPLNSGFPG KKKRKLWTKE EDMKLIAAVQ KFGEGNWANV FKGDFKHERT ASQLAQRWAI  180
IRKRQTNLNH NGKSRSEEML AAQKALSIAL DMPMKGSLPT IHSGTTQAQK SSSSTVLAEA  240
TTEPLAETRN ASTSTSEALN QNHNKGAPNL SSKLLTSQKR KAFLAKVKKP STSPDPLIKA  300
AAFAAGGRIA TPSTAASLFK AARSKAAVHI QHGGSDSIRK PLGATASSTT ITRPKLSQLR  360
VCSGKAVYHP PSESTKLRSS ELRNPGTSVS CNLVESVEQK RSIIISAADV DELLAEDVGG  420
AEKEAFGISG DQKRKLNEKQ QGIAGQKSMT NQSGEEDMEA DGVMKQNKGS GNAGPHSSAS  480
DCYSNQDAEF EAKGNSED

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	136	KKKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	5e-39	MYB_related family protein