PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA47253.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 304aa MW: 33613.4 Da PI: 8.5541

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA47253.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.1	2.1e-50	13	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhP+d+el+++yL kk++++ ++ ++i+++d+yk++Pw+Lp+k+ +e ew+fFs+rd+ky++g r+nr+++sgyWkatg+dk++l++ +++ PKA47253.1 13 LPPGFRFHPSDQELINCYLSKKLTSSLPPEWDIIADIDLYKFNPWELPQKAFFGEGEWFFFSPRDRKYPNGVRPNRSAASGYWKATGTDKPILAAgGRQ 111 79********************9999999*************87778899**********************************95566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g+kk Lvfykgr pkg+kt+Wvmheyrl PKA47253.1 112 CIGVKKALVFYKGRPPKGTKTEWVMHEYRL 141 6*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MEGRGEILMR SQLPPGFRFH PSDQELINCY LSKKLTSSLP PEWDIIADID LYKFNPWELP 60 QKAFFGEGEW FFFSPRDRKY PNGVRPNRSA ASGYWKATGT DKPILAAGGR QCIGVKKALV 120 FYKGRPPKGT KTEWVMHEYR LLDSMAPAMS QKQKCSMRLD DWVLCRVRRK GSSPEESGDA 180 PEISSPTQSV VTFGAQSEEE QKLLIDCSEN QFAAGYLFES YMPGSTGTGT GAGAGAGVFM 240 ATQQQLPQLV PMVSPSKRKA SYGALDEMMM LQPGSKRFQC LTGGMASPAN SPAVNQGFPA 300 EFFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	4e-76	NAC family protein