PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA47273.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 496aa MW: 54018.8 Da PI: 9.6601

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA47273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.3	2e-55	189	316	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL kkv +++++ ++i+e+d++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ +g+ PKA47273.1 189 LPPGFRFHPTDEELITHYLVKKVLDSSFTG-RAIAEIDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSrTGS 286 79***********************999.89***********99999************************************987888 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 lvg+kktLvfy+grapkgek++Wvmheyrl PKA47273.1 287 LVGMKKTLVFYRGRAPKGEKSSWVMHEYRL 316 9*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MATRSRTSSC TSEHVANRSA ALSHVTGNFL HNSALPPPIL LMRKITSIRW PTSPVLVLIF 60 LSSSLSGLPQ LNSLLLPFSP CPLTENASTI SDARSHTPLP SFSSIPRHGY HKPPALLCSC 120 SIAEQNKTKR RGTSRDKCLV LLPYHTSLPE TLIRRILIKL HCPVPKQSSP ASILRLLLQS 180 SSPASLIDLP PGFRFHPTDE ELITHYLVKK VLDSSFTGRA IAEIDLNKCE PWELPEKAKM 240 GEKEWYFFSL RDRKYPTGLR TNRATEAGYW KATGKDREIY SSRTGSLVGM KKTLVFYRGR 300 APKGEKSSWV MHEYRLDGKF AYHFLSKPSK DEWVISRVFQ KNGGLKKGRS GFALAGEGGW 360 AGGGASFSDV TSSGSASSPY AALLEPPSFA IAAAGDRESC ANSSLERDHV PCFSTFSCGG 420 VQSLAFPNLR SLQDNLHLLV FPSGLVAMPA EAVGPSCGSG GLNGKSDAMA GGAGGWPFDL 480 ERKMGNNSEL DCLWSF

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MATRSRTSSC TSEHVANRSA ALSHVTGNFL HNSALPPPIL LMRKITSIRW PTSPVLVLIF  60
LSSSLSGLPQ LNSLLLPFSP CPLTENASTI SDARSHTPLP SFSSIPRHGY HKPPALLCSC  120
SIAEQNKTKR RGTSRDKCLV LLPYHTSLPE TLIRRILIKL HCPVPKQSSP ASILRLLLQS  180
SSPASLIDLP PGFRFHPTDE ELITHYLVKK VLDSSFTGRA IAEIDLNKCE PWELPEKAKM  240
GEKEWYFFSL RDRKYPTGLR TNRATEAGYW KATGKDREIY SSRTGSLVGM KKTLVFYRGR  300
APKGEKSSWV MHEYRLDGKF AYHFLSKPSK DEWVISRVFQ KNGGLKKGRS GFALAGEGGW  360
AGGGASFSDV TSSGSASSPY AALLEPPSFA IAAAGDRESC ANSSLERDHV PCFSTFSCGG  420
VQSLAFPNLR SLQDNLHLLV FPSGLVAMPA EAVGPSCGSG GLNGKSDAMA GGAGGWPFDL  480
ERKMGNNSEL DCLWSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	4e-97	NAC family protein