PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA47457.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TCP

Protein Properties

Length: 299aa MW: 31405.2 Da PI: 7.8734

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA47457.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.9	8.8e-39	58	144	2	88
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++++as+ +++ +++ ss++ PKA47457.1 58 APKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASAIANAAAGAAVAPSSIS 144 789******************************************************************887333333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MDPKGSAELQ QEQPRLEKGE PRRELHIVKP SSSSAAEREL PLAAVAEAEK EDQRKQLAPK 60 RSSNKDRHTK VDGRGRRIRM PALCAARIFQ LTRELGHKSD GETIQWLLQQ AEPSIIAATG 120 SGTIPASAIA NAAAGAAVAP SSISAGLHPK LSEPPPSAAA AAAARLNWAP GIWPPLSGGF 180 SGHGFLPPAT NIGGGGDGPA GGFVQRIGLP GFELPVSNMG QMSFASLLGG HGQQMPGLEL 240 GLSQDGQIGF LNPHALSQFY LQMGQGRGGR SEDQLQLHHQ QNQQNKGSLD KDDSEGSTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-61	TCP family protein