PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA47538.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Protein Properties

Length: 194aa MW: 21519.2 Da PI: 8.7654

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA47538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	95.8	2.9e-30	27	132	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 f+k ltpsdv+k++rlv+pk++ae++ g e++ l +edes+ +W+++++y+ +s++yvltkGW++Fvk++gL++gD+vvF + + s+ PKA47538.1 27 FEKLLTPSDVGKLNRLVIPKQHAEKFfplagtaAG--EQGLLLNFEDESSqSTWRFRYSYWTSSQSYVLTKGWSRFVKEKGLDAGDIVVFLRRRApSGD 123 99*************************996533..47789*766599************************************99988999 PP ..EEEEE-S CS B3 91 elvvkvfrk 99 +l+++ +r+ PKA47538.1 124 RLYIGSRRR 132 999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MDSYHYYHDY RSLPPVEEEV AGKELMFEKL LTPSDVGKLN RLVIPKQHAE KFFPLAGTAA 60 GEQGLLLNFE DESSQSTWRF RYSYWTSSQS YVLTKGWSRF VKEKGLDAGD IVVFLRRRAP 120 SGDRLYIGSR RRSGSGEQPS PSTCFCLRSN PQVLENGYAA EQSNVAAAAA AAAAAAGNSK 180 RLRLFGVNLE CGHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36080.1	5e-53	B3 family protein