PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA47605.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 228aa MW: 25257.8 Da PI: 9.7379

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA47605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	133.7	1.2e-41	15	151	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk............kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lppGfrFhPtdeelv +yL +k+ +l++ vi+e+++ +++PwdLp + +++ e yfF+ + k+ +r++rat+sgyWka g PKA47605.1 15 LPPGFRFHPTDEELVIQYLWRKAFFYPLPA-AVIPEANLSRIDPWDLPDlelwlnlvgangRKGGGQPERYFFHLIAAKS---SRSSRATASGYWKAAG 109 79*************************9.89***********5589999887765333456699*98875...69********** PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k+k+++++ ++++vg+kktLvfy+gr p g++t+Wvmhey+l PKA47605.1 110 KEKKITASkSNHVVGTKKTLVFYHGRPPAGHRTEWVMHEYSL 151 *99856778*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MEKPSPSPSP LAVRLPPGFR FHPTDEELVI QYLWRKAFFY PLPAAVIPEA NLSRIDPWDL 60 PDLELWLNLV GANGRKGGGQ PERYFFHLIA AKSSRSSRAT ASGYWKAAGK EKKITASKSN 120 HVVGTKKTLV FYHGRPPAGH RTEWVMHEYS LAGTIPLPPE QAKQWVLCRM FIKKTSAEIS 180 GYRGFIDFMG EKRRRRGCSS SSSSDLSCVT EIEDGSSGGE SSGCCSPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	4e-42	NAC family protein