PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA47730.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family E2F/DP
Protein Properties Length: 435aa    MW: 47802.7 Da    PI: 6.4414
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA47730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP78.56.3e-25155220171
     E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 r+++sL+llt+kf++ll+++++g+++ln +a+ L   dv  ++RRiYDi+NVLe+++liek+ kn+i+ kg
  PKA47730.1 155 RYDSSLGLLTKKFINLLQQAQDGTLDLNRAAEIL---DV--QKRRIYDITNVLEGVGLIEKQLKNRISLKG 220
                 6899******************************...**..**************************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
MNDGSANSTF SPEHPQKAQL QPPAARATPG QILCSALNRH FRFLPPKSAA GPVFDVRISR  60
KEPAAGDGGK GKEKEKLLTP ELTLKTTNGV RDFDGLSIVA EKAQYDRISN HIARPASLSG  120
VKRQRNSKPT RNKGSVQYDP GPHEGTPAGA SSACRYDSSL GLLTKKFINL LQQAQDGTLD  180
LNRAAEILDV QKRRIYDITN VLEGVGLIEK QLKNRISLKG FDMSRPNEVG AEITGLKVEL  240
QRLESEDCRL DTMISNMQKN LRLFSEDENN EQWLYLSKED ICSLPGFQKS TLIAIKAPHG  300
TSIEVPNPDE GLEFPQRLYQ MLVRSSLGPI DCYLISNHEE RSEASNLGQL SAAMYLSNDN  360
SCSSMLCVMG PHPTDPNIVS ASDHGHDQAN KHTFSDSNMS RDSVGGMLKI TPLHNDADYL  420
LLSDDGFNLS DSWNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.12e-86E2F/DP family protein