PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA47734.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 308aa    MW: 35302.1 Da    PI: 6.0946
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA47734.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.11e-134990346
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     + +++E+  +++ ++++G++ W+ I+r+++ gRt++++k++w++
       PKA47734.1 49 PISPDEETMIIRFHAMFGNK-WSMISRYLP-GRTDNEIKNYWNT 90
                     679*****************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MDQVLLEYLA KNNTKNWVTI AKNSGLQRDS RSCRFRWVTH LDPHLKKEPI SPDEETMIIR  60
FHAMFGNKWS MISRYLPGRT DNEIKNYWNT RIKRCKKSAQ PLYPPDIQCR VLNQSNRSPL  120
APLVPPAGEV LLIALHQIQS VLPLTSSSDV STHLPPFLSL PLNDNMDFQV NHNNNDQFQF  180
CNWSEFDSLQ LPPLDLLSPD PHHSKSAFAN SQEQGIYEEE TLDAQLLNWQ RSYAYVVEDL  240
LAIDSPIQTN NSFGYFPKNQ VNKEILPTNQ KTMTMITREV EQGKIPGSPD QLELLSLSPL  300
DPFAIFLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32460.13e-38MYB family protein