PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA47746.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 249aa    MW: 27134.1 Da    PI: 4.8944
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA47746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.17.9e-174290356
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                ++GVr++  +g+Wv+eIr+p+    +  r++lg++ ++e+Aa+a++ a+++l+ge
  PKA47746.1 42 FRGVRRR--SGKWVSEIREPR----KaNRIWLGTYPSPEMAAAAYDVAALALRGE 90
                89**854..6*********95....358*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MADPPIPPPP RSVPPHSPDD LHSSSSPAAA AAAASTSPTG SFRGVRRRSG KWVSEIREPR  60
KANRIWLGTY PSPEMAAAAY DVAALALRGE DAVLNFPDAA RLRQPPASAS PTDIQAAAAA  120
AAAEWAVKFK DDGASRPSPE ANEERNWERF FDEEEMLHLP QLLVSMAEGM MMSPPRLSSP  180
ESDNSPEVSE GENLWIFDEH RNSNHRPRCL VEPQNIDHEI TATALPIIGY DSNVHTIFHD  240
VSPNSFKTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-37ERF family protein