PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA47790.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TCP

Protein Properties

Length: 220aa MW: 22978 Da PI: 8.1044

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA47790.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	107.9	1.5e-33	65	134	7	74
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..e 74 ++ ++hTkv+gR+RRvRl+a caar+F+L++eLG+++d++tieWLl qa+pai ++tg++ s++ + PKA47790.1 65 PSRDRHTKVEGRGRRVRLPAVCAARIFQLTRELGHKSDGQTIEWLLHQAEPAILAATGSGISPSPIAilP 134 578********************************************************87777333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MSSASSSQPS DLILYRPTPS LAPSVVPLQP TEPVYDRGCS SSRPKKRVSS EHTCGGAASS 60 SLTMPSRDRH TKVEGRGRRV RLPAVCAARI FQLTRELGHK SDGQTIEWLL HQAEPAILAA 120 TGSGISPSPI AILPPAAAAP STPSPSSPPP PPAAYFQFSG IMDYSAGLGG MGFSPVAAAM 180 AGGGEGGMGF RHVPYYTAML MRPATADEES HTAAELRHED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	6e-32	TCP family protein