PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA47951.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 191aa    MW: 21419.3 Da    PI: 5.0555
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA47951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.92.1e-3241231128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGf+F P+deel+v++L  k++  +++  ++i+ vd ++++Pw+L+ k+ ++  +wyfF++r  ++        +t++g W++ g d+ v+s +g +
  PKA47951.1   4 LPPGFQFFPSDEELIVHFLFYKAALLPIQP-DIIPVVDSHHCDPWELQGKALQGGGSWYFFCRRLPES-------HSTANGHWRSVGDDEVVMS-GGIE 93 
                 79**************************99.99**************976667789*******97754.......56889************99.9*** PP

         NAM 100 vglkktLvfykg.rapkgektdWvmheyrl 128
                 vg+kkt+vfy g  a  g+kt+Wv+h+y+l
  PKA47951.1  94 VGIKKTMVFYAGeAAGGGVKTRWVLHQYHL 123
                 **********993456689*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MSGLPPGFQF FPSDEELIVH FLFYKAALLP IQPDIIPVVD SHHCDPWELQ GKALQGGGSW  60
YFFCRRLPES HSTANGHWRS VGDDEVVMSG GIEVGIKKTM VFYAGEAAGG GVKTRWVLHQ  120
YHLLRRASTV AGRKASGSID LKKWVICRVY EANCEKKDGD IYSEANELSC LDEIFLTLDD  180
DFDEVISFPN Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.11e-53NAC family protein