PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA48022.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 222aa    MW: 24074.6 Da    PI: 9.9091
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA48022.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48e-114495155
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                +r +h  +Er+RR+ +N+ +e Lr+l+P++      + + a++   A+e++k+L+
  PKA48022.1 44 QRLSHISVERNRRRLMNEHLEALRSLMPSS---FLHRGDQASVIAAAIEFVKQLE 95
                699**************************9...8999****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MESCITHSSF ANGRAGQSPA TERKKRKRGS ARKGVYAGAE AESQRLSHIS VERNRRRLMN  60
EHLEALRSLM PSSFLHRGDQ ASVIAAAIEF VKQLEQTLLL LKAEMTTRTA PAGAGEETLS  120
RAAMLVDGFL TSPQTVAQGH VNLKVAATRR AGQVATAIAA MDELRLTVLH LCITSLDAIT  180
VLYSFNLKME EDCRLGSADE VAAVVHQIFC SGKKAGKGDK RE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12328RKKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.11e-50bHLH family protein