PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA48465.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C3H
Protein Properties Length: 670aa    MW: 74149.9 Da    PI: 5.5874
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA48465.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.93.2e-07117140327
                 S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   3 telCrffartGtCkyGdrCkFaHgp 27 
                 t++C +f+  G C  Gd+C+F Hgp
  PKA48465.1 117 TVPCYYFQM-GGCLKGDKCSFVHGP 140
                 899**8888.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    
MDSGSGRSDP RPVTAKEEAV KRNTDCVYFL ASPLTCKKGS ECEYRHSEGA RVNPRDCRYW  60
LKGNCLNPKC LFRHPPLDGL VGNTGDTSVP LFTATQITPS MQLSVANSSA LNPTRNTVPC  120
YYFQMGGCLK GDKCSFVHGP QPAVNLAVQP AAKSSVPVGT QLEKPKETLG IKKCDGQQNF  180
STKESAKPIN GSNKSAKGLK VLENPSTNFV HNSSLLPHSG GMGLSRSQAT NVHMQADEHH  240
QLGREDGEIF REPSRFHNTS FSGPVNHRIR SLDDSYRNGR GAEEALRESS PGFDVLVDDV  300
VEDTEFFHDR DGFTTVSVHG ERDLRTSSVS ERISEKPISS ERRSAGRLRS PDNNVMDVVD  360
LRHQLLKQRR LNGFLPANTS DHHVEPCRRN EQNLRDRSNK LDLRKASETT LSSRLRGRIT  420
LPTPSSPEIP FDVEVNRDRI RQRSRLSPVR QSVTHARHGE RSSRWREDDS AITRSLSKQL  480
KARDVDDSLD FAGPKSLAEL KGVKPSKAAT LEESETISFE GPKPLSALLK RKREPGSEND  540
GASAVSYGIK ESGEREVISS TSSAGPIPEM LSVNAVEAGS NLEELKVGAV EEEEEEGLFP  600
AEDEQITYEQ QYTAEDQELD YADGRGKEGN YARYEDENYG TEDENPMDVD VEVDDDDADD  660
FAKKIGLIFS