PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA48511.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NF-YB

Protein Properties

Length: 126aa MW: 14399.5 Da PI: 8.1869

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA48511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	182.1	4.5e-57	20	114	1	95
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrflPian+srimkk+lP n+ki+kdaketvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy+eplk+yl+kyre+ + PKA48511.1 20 VREQDRFLPIANISRIMKKALPPNGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKLYLQKYREVMN 114 69******************************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 126 aa Download sequence
MASETPASPE SGEQSPKSNV REQDRFLPIA NISRIMKKAL PPNGKIAKDA KETVQECVSE 60 FISFITSEAS DKCQKEKRKT INGDDLLWAM ATLGFEDYIE PLKLYLQKYR EVMNSRLKRN 120 DQLLIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38880.6	3e-66	NF-YB family protein