PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA48554.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WOX
Protein Properties Length: 258aa    MW: 27267.1 Da    PI: 6.3589
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA48554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox611.8e-193089357
                --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                +R+++tk+q+  Le l+++  r+p+a++++++A kl     ++ ++V++WFqN++a++++
  PKA48554.1 30 SRWNPTKDQISLLEGLYRQgVRTPTADQIQQIAGKLrefgPIEGKNVFYWFQNHKARQRQ 89
                6*****************99*******************99*****************97 PP
2Wus_type_Homeobox1101.3e-353090464
  Wus_type_Homeobox  4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       +RW+Pt++Qi +Le ly++G+rtP++++iq+i+ +L+e+G ie+kNVfyWFQN+kaR+rqk
         PKA48554.1 30 SRWNPTKDQISLLEGLYRQGVRTPTADQIQQIAGKLREFGPIEGKNVFYWFQNHKARQRQK 90
                       8***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MEEQKPPSSA SPSSSSAAAS AAAGGMTGGS RWNPTKDQIS LLEGLYRQGV RTPTADQIQQ  60
IAGKLREFGP IEGKNVFYWF QNHKARQRQK EKQETYAYLN RRLHRHLPPP STPAPTTPAP  120
PQPATFSPCS LTPPTNGDVI CAPFCLQVPA FCGGGGLFPK VYRGPAGKMP EVRSAGSSAA  180
TGAVAGGGAG EGRGHAPRET LQLFPLHPAG MLEEKSSGSL TSASTDTAGG EEEEQNEQDE  240
NDGGGENRPY IDFFGDQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.13e-40WOX family protein