PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA48643.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB
Protein Properties Length: 296aa    MW: 32877.2 Da    PI: 6.0385
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA48643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.97.5e-112673247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     g+WT++E +l+ +a + +  +   +W+++a++++ g+t  +++s+++++
       PKA48643.1 26 GNWTQQENKLFENALAHFDIDtpnRWDKVAEMIP-GKTVDEIISHYRDL 73
                     89****************999999**********.***********986 PP
2Myb_DNA-binding49.11.3e-15135179347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W++eE+++++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
       PKA48643.1 135 PWSEEEHKRFLMGLKKYGKGDWRNISRNFVLTRTPTQVASHAQKY 179
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MTNPWRDGPG CTSFPDGSLA DQNKSGNWTQ QENKLFENAL AHFDIDTPNR WDKVAEMIPG  60
KTVDEIISHY RDLEDDVGYI EAGLIPTPGY SSSSFTLDWE NDRCYDDLAA EQPYCAPGKR  120
SGTRLFDQER KKGVPWSEEE HKRFLMGLKK YGKGDWRNIS RNFVLTRTPT QVASHAQKYF  180
IRLNSGGKDK KRASIHDITT VCLPDNGPSS PSRPSASSMH STSSATAPST DSQFSAMFDS  240
QQPNEAATVP NSAVYGDQLI QSSYGVLQLG IESQGQQLHQ GSHLGAMDGH QTSYFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.13e-84MYB family protein