PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA48892.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 137aa    MW: 15478.3 Da    PI: 10.2054
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA48892.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.82.3e-14250455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 h  +Er+RR+++N+ +  Lr+l+P     + k+ + a+i   A+eYIk+Lq
  PKA48892.1  2 HHISVERNRRKKMNEHLRALRSLMPCF---YVKRGDQASIIGGAIEYIKELQ 50
                6889**********************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MHHISVERNR RKKMNEHLRA LRSLMPCFYV KRGDQASIIG GAIEYIKELQ LLLHSLEAKK  60
QRKGVTGLGA CCNSSVADVE AKIMGSNVIL RVLSKRAPGQ VVKVITVLER HAFEILHLSI  120
SSMEDTVLYS YYMKVLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.18e-59bHLH family protein