PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA48953.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 280aa MW: 31679.3 Da PI: 5.2668

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA48953.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	56.2	1.2e-17	5	51	1	48
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 + pGfrF+Ptdeelv +yL++k+++k+l++ evi+++diyk++PwdLp PKA48953.1 5 MLPGFRFQPTDEELVGFYLRRKIQQKPLSI-EVIRQIDIYKYDPWDLP 51 579*************************.99************9 PP
2	NAM	52.6	1.5e-16	53	100	82	128
NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +Wkatg+d++ +s+ + + +glkk+Lvfykgra kg+ktdW+mhe++l PKA48953.1 53 FWKATGTDRPFYSSeGIKCIGLKKSLVFYKGRAAKGTKTDWMMHEFSL 100 7**********844455*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MEEIMLPGFR FQPTDEELVG FYLRRKIQQK PLSIEVIRQI DIYKYDPWDL PRFWKATGTD 60 RPFYSSEGIK CIGLKKSLVF YKGRAAKGTK TDWMMHEFSL KLILGLSARS SRRLAPQQHI 120 KDSEKLSEFP TEDDSQFGPE KVSSITEVGS HILFGAVTCP SPVNLMKCKP DNASSFQINT 180 SKLSKPSVDV ASMLLNVSPS VLEKMEKNCS IIEFETEQQA IGFTSDFPLE MNGNLGTDDG 240 ILAMELANDP KEYEFSLQLS TKCFRRMEVE PTMGNSTLSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	3e-54	NAC family protein