PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA48964.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YB
Protein Properties Length: 161aa    MW: 18264.6 Da    PI: 4.3101
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA48964.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB73.43.6e-231199391
       NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91
                ++d  lP a + +i+k++lP + ++++d+++++ +c +efi +v+se+++ c+re+++ti+++ +l al  lGf dy+e++ +  +++r
  PKA48964.1 11 KEDVSLPKATMFKIIKEMLPPDVRVARDTQDLLVDCCVEFINLVSSESNEVCNREDKRTIAPEHVLKALEVLGFGDYIEEVYAAYEQHR 99
                68999**************************************************************************9977666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MEPMDIVGKS KEDVSLPKAT MFKIIKEMLP PDVRVARDTQ DLLVDCCVEF INLVSSESNE  60
VCNREDKRTI APEHVLKALE VLGFGDYIEE VYAAYEQHRL ETLDSPKGGR FSGIEMTEEE  120
AAAEQQRMFA EARARMNNGV TLQKQPELDQ VESRKADNEE I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.43e-68NF-YB family protein