PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49011.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 262aa    MW: 28240.8 Da    PI: 7.4483
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49011.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-173483255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d +   ++ r +lg+f tae Aa+a+++a+  l+g
  PKA49011.1 34 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEAAARAYDEAACLLRG 83
                899******.7*********32...35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MELQKQTQIS PIPTAKFKGR TKPISGSTAG GGHKFVGVRQ RPSGRWVAEI KDTTQKIRMW  60
LGTFETAEAA ARAYDEAACL LRGANTRTNF STRRSAATAG ESPFAARIQK LLHHKKLAGT  120
AASTPATSTI AGASSLSSSS STITDSASSG KQCSPEVCGP YSVKQSPPVL HEPYYGEEFE  180
LGCSWAFESM LDMGFSGMVP ATAGGEPETV AVSEFEMMKV ERQISASLYA MNGVQEYFEA  240
IQDLSSSEPT WELPPLYQIY RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-33ERF family protein