PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA49032.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WOX

Protein Properties

Length: 207aa MW: 23191.2 Da PI: 9.1211

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA49032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67	2.6e-21	6	66	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eql +Lee++++ r+p+a+++++++++l +++ ++V++WFqN++a+e++ PKA49032.1 6 STRWCPTPEQLMILEEMYRSgVRTPNATQIQQITAHLayygKIEGKNVFYWFQNHKARERQ 66 58***************99************************************97 PP
2	Wus_type_Homeobox	122.6	1.5e-39	6	67	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +tRW+PtpeQ++iLee+y+sG+rtPn+ +iq+ita+L+ yGkie+kNVfyWFQN+kaRerqk PKA49032.1 6 STRWCPTPEQLMILEEMYRSGVRTPNATQIQQITAHLAYYGKIEGKNVFYWFQNHKARERQK 67 79***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MPQVPSTRWC PTPEQLMILE EMYRSGVRTP NATQIQQITA HLAYYGKIEG KNVFYWFQNH 60 KARERQKLRR RLSRQPPPPP PAPPSSDQLP FHFHTNLEDS SLIPPPNLYH HLHPHFLHQG 120 GRIHEETRQI MGMDLLGKLE TGGGSREEAS SSGTSTATYG GQWMMTMEAS GSGQPLRTLE 180 LFPTKSTTGL KAECSTSKSS SCSGSTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	1e-36	WOX family protein