PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49067.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 338aa    MW: 37809.3 Da    PI: 8.4498
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.82.1e-12557148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqkyl 48
                     +++WT eE+  l+ +v ++G+g+W+tI r          R+  ++k++w++ +
       PKA49067.1  5 KQKWTSEEESALKAGVDKHGSGNWRTILRDPEfsgilFLRSNVDLKDKWRNMR 57
                     79***********************************55***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGAPKQKWTS EEESALKAGV DKHGSGNWRT ILRDPEFSGI LFLRSNVDLK DKWRNMRVTA  60
NGWGSREKAR VGLKKFRVLP ERDDNLLAMS TLEEHDEFVD YKPLTMSSEI MRITGRKRSV  120
MKIEDLIMEA ITFFKEPKGS NKTAIASYIE DQYMAPADFR VLLSANLKAM TASGKLFKVK  180
RKYRISPCSS IPGWRKSQVL PLEVNRREPL KIDTNDAMRK PKGQIDVELA RVKNMTAQEA  240
AASAAQAIAE AEKAITEAEE AAREADAAEI DAEAAQTFAE AAMLSLKSRN TSKLHLAWEM  300
CFEVTVNHLL TSIEWAISIA NGNLKTDQEN DVGNVLCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.12e-77MYB_related family protein