PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49155.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 247aa    MW: 26765.4 Da    PI: 8.495
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49155.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.93.3e-1261107354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 r+h e+E+rRR+ri+s +++Lr++l  +     +K +Ka+ L +Ave +++L
  PKA49155.1  61 RNHREAEKRRRERIKSHLDRLRSILSCD-----PKTDKASLLAMAVERVREL 107
                 78***********************998.....7*************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MYRRPPDAHD ASNRRPPELT PAVAVSLPSY LMASFFPMDV ATAAAGSAAD PPADRALTAS  60
RNHREAEKRR RERIKSHLDR LRSILSCDPK TDKASLLAMA VERVRELKQR TAEIAQAHFF  120
PTETDEIIVL PGTHNSVSDD SGSGPPAAAV FEASLCCEDR SDLLPELIET LRALRMRTLR  180
AEMATLGGRV RNVLVLAKEK DEEYAGSESS GDGGGLLREA LRAVVSRAPL AGGERAKRRK  240
MIDGGGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.13e-32bHLH family protein