PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49297.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 186aa    MW: 20552.7 Da    PI: 10.0111
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.3e-081361654
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                + +E++RR +++s  ++L +l+Pk+   ++   s  + L  A  YIk+L
  PKA49297.1 13 KTVEKNRRMHMKSLCFKLASLIPKQEYIYKDSISQQDHLDVAAAYIKKL 61
                679*********************646777779999***********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MMKSGEGKIM DRKTVEKNRR MHMKSLCFKL ASLIPKQEYI YKDSISQQDH LDVAAAYIKK  60
LKERIVSLKQ QKMLSGGHGG SAAAAGTAQD PADSRGGKLG FHLPMIDVRH RDPNLEVLLI  120
ISSSEASFSF HRVIGVLEEE GAEVVNASFS AVGDKIFYTV HSQAISSRIG LEASQVTERL  180
KQLIRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-22bHLH family protein