PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49316.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ZF-HD
Protein Properties Length: 288aa    MW: 31205.8 Da    PI: 8.7149
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer87.71.2e-2764114358
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                  ++rY++C++NhAaslGgh++DGCgEfmp       a+ +kCaACgCHR+FHRre +
   PKA49316.1  64 SARYRDCQRNHAASLGGHVLDGCGEFMPG-----AADPMKCAACGCHRSFHRREGD 114
                  689*************************6.....689****************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MDFRREMNEE DDERTSSFTP HPIRESAFSK PQLPSSSSLL AAGGARNGEP GAGGGGGRGG  60
EQASARYRDC QRNHAASLGG HVLDGCGEFM PGAADPMKCA ACGCHRSFHR REGDGDQILY  120
THRHHNGSNF AGGGGGVNPG RIPLLLPPPH LPNQLKQTHC FPASPSAAMV AFGQSGGGTT  180
TESSSEELGR VAAVAGAGSG HRPLAKKRFR TKFTAEQKMR MLEFAERIRW RIQRQDEAEM  240
ERFCSDVGVS RQVFKVWMHN NKHSVQKPQL QPPPEQPPPQ QPQQGPDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.14e-24ZF-HD family protein