PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49317.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 101aa    MW: 11569 Da    PI: 8.4366
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49317.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.38.6e-09953345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      WT+   +l+ +a + + ++   +W  +ar +g g+++ ++k ++ 
       PKA49317.1  9 TWTPKQNKLFERALAVYDKDtpdRWQNVARVVG-GKSADEVKQHYE 53
                     7********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MANRNPCSTW TPKQNKLFER ALAVYDKDTP DRWQNVARVV GGKSADEVKQ HYELLVEDLS  60
YIESGKFPFP KYKPSAPGRN LSAEDEQSSN RALNSLPLFY F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.14e-34MYB_related family protein