PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA49717.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NF-YB

Protein Properties

Length: 180aa MW: 19985.2 Da PI: 5.6943

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA49717.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	181	1e-56	28	123	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 req+r+lPianvsrimkk+lPanakiskdaket+qecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+k+re+eg++ PKA49717.1 28 REQERLLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKLYLQKFREVEGDR 123 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MESSDNEFES GRLNNSRAAG NCELSSPREQ ERLLPIANVS RIMKKALPAN AKISKDAKET 60 MQECVSEFIS FITGEASDKC QREKRKTING DDLLWAMTTL GFEEYVEPLK LYLQKFREVE 120 GDRAGGSSSS SSLLQQRDGV AGGNGADFSS RTDGSGMMVM GQQFYGPFPS PAYYHHQFHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47640.1	2e-65	NF-YB family protein