PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49791.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 233aa    MW: 23361.1 Da    PI: 8.3343
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49791.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.0001987109123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC+ Cgk F +   L  H  +H
  PKA49791.1  87 YKCSVCGKAFASYQALGGHKASH 109
                 9***********99998888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MILSEVAAPA TGSEEAAAAS HPVEGWAKRK RSKRPRCFDQ PPTEEEYLAL CLIMLARGGG  60
GGEGGGGGGG GGGSGHHLPP LSSSQSYKCS VCGKAFASYQ ALGGHKASHR KPLSSAAEDG  120
ASSAAASASP GTSAAASCSA GKVHRCSVCQ KTFPTGQALG GHKRCHYDGN ASAAAASSSE  180
ATSSVQKGFD LNIPALADVT LEGGRRCVAG LAAEEEEVQS PLALKKPRFL IPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.14e-43C2H2 family protein