PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49792.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 78aa    MW: 9161.88 Da    PI: 9.7269
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.2e-118481055
                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                ++RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  PKA49792.1  8 QKRRERINKRLKILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 48
                79*****************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MNELLLVQKR RERINKRLKI LQNLVPNGTK VDISTMLEEA VQYVKFLQLQ IKLLSSDELW  60
MYSPLAFNGM NVWGLDLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.32e-40bHLH family protein