PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49884.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 198aa    MW: 21472.1 Da    PI: 9.7021
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49884.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.96.9e-202575155
         AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++ a+++l+g
  PKA49884.1 25 TRFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDSAARALRG 75
                589*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MRKDRSGEPA TVALTGAPPP TGKETRFRGV RKRPWGRFAA EIRDPWKKTR VWLGTFDSAE  60
DAARAYDSAA RALRGPKAKT NFPPFPSHAS TPAGGQIFTQ PPAPPPRPTS SSMSSTVESF  120
SGPRLSVPRL SSIHIKRPTN PAPPRVLAGD EDCHSDCGSS SSVVDDDDIA SEYRIPLPFD  180
LNLFPPPEDD LQSTALRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.14e-23ERF family protein