PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49972.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YA
Protein Properties Length: 376aa    MW: 41617.6 Da    PI: 8.7923
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.81.6e-32186242158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++I++RRq Rakle+++kl +k rkpylheSRh hA++R+RgsgGrF
  PKA49972.1 186 EEPIYVNAKQYNGIVRRRQLRAKLEAQNKL-IKVRKPYLHESRHLHAMKRARGSGGRF 242
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MSLEKNIPWN SKVLNMQFNK DFILSASNCQ NDGFLKWNSS GSHIPQPSLK NLHINTDYHI  60
EHFNQEKLLG YQLQEQESSS THSSGLSPDD APEMIGSNKE GCSFTGHDST VEQTRGKMKP  120
VLSLGSQEVI FQSPKNDYSQ NMTYVAYPYA DPSYYGGVMA AYGSYAFMMG MVPPGRVPLP  180
LETTEEEPIY VNAKQYNGIV RRRQLRAKLE AQNKLIKVRK PYLHESRHLH AMKRARGSGG  240
RFLNTKKLPQ QLSVVEGKNG SPPSLRNPGN NEEDQNQAEN EARFPGNSID FITSSSFTAP  300
AAADSSNGVD FHHNGQHLGC GSDFLPLLVG TGQSSSSTIH PGSFRRVPVP RDLRASKSLL  360
SGEAALPICR NQRSFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.17e-34NF-YA family protein