PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50002.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 235aa    MW: 25706.6 Da    PI: 5.0608
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50002.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.23.1e-21107155355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+W+AeIrdp     r  +r +lg+f+taeeAa+a+++a+++++g
  PKA50002.1 107 YRGVRQRP-WGKWAAEIRDP-----RlaARKWLGTFDTAEEAARAYDRAALEFRG 155
                 9*******.**********9.....667*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MASPKQELHL RPFSKTLPLT APASSSAGHR PYSSEQEAAI MVSTLINVIS GERRPLTDVL  60
SRPEPCNQFG SSDDCLGCSF FEGEAAAHNA LDISGGGRRR RRKKNLYRGV RQRPWGKWAA  120
EIRDPRLAAR KWLGTFDTAE EAARAYDRAA LEFRGPRAKL NFPFPDNVSS GTGEEEDDNV  180
GEVTPTELTG EAPAGVPAAM VEGVKVQGEE NMESFWDGLQ DLVPLDGEEA ARNHQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198104RRRRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.18e-26ERF family protein