PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50186.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 314aa    MW: 34657.6 Da    PI: 7.8676
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50186.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.72.4e-32652081128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........tksgy 82 
                 lp+G++F+Ptd+el+ e+L+ k++ +       ++++   i+   +i++++P++Lp  v+ + +  +fF++ +k+y+tg+rk+r+           + +
  PKA50186.1  65 LPAGVKFDPTDQELL-EHLEGKARPDLqklhplIDEFIPtIEGEnGICYTHPEKLP-GVSRDGQIRHFFHRPSKAYTTGTRKRRKvhsgddpagGGETR 161
                 799************.99**99887664454443332333665557**********.555666777******************846666554433667 PP

         NAM  83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 W++tgk+++v++ +g ++g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  PKA50186.1 162 WHKTGKTRPVVV-SGDVKGYKKILVLYtnYGKQRKPEKTHWVMHQYHL 208
                 ************.9999**********6657999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MTWCSSCDED DDHDRRIDDK PPQSTALIPR RSPSRVIKCC PSCGHRFQHD ELGCSNGGIE  60
DLPGLPAGVK FDPTDQELLE HLEGKARPDL QKLHPLIDEF IPTIEGENGI CYTHPEKLPG  120
VSRDGQIRHF FHRPSKAYTT GTRKRRKVHS GDDPAGGGET RWHKTGKTRP VVVSGDVKGY  180
KKILVLYTNY GKQRKPEKTH WVMHQYHLGS DEEEKDGEFV VSKVFFQTQP RQCGSVTAAA  240
AAAAAARSEG AALRGNHLKN KVVDGDDESS NAVDYYSSSA LISYSHGGQH RASSPRLIPN  300
FSSTVHAGGP SFLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-113NAC family protein