PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50290.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 288aa    MW: 30881.7 Da    PI: 10.2743
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50290.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding461.2e-1495139347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++ ++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
       PKA50290.1  95 PWTEEEHLTFLAGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKY 139
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MDGSTGGERG LKLFGVRIVD GDRRWREERT AAVEGENEEA VRKSMLKSKS MGNLAACAGS  60
PAGEKGAGDH GYLSDGGLVQ SSRGRAGHER KRGVPWTEEE HLTFLAGLEK LGKGDWRGIS  120
RNFVTTRTPT QVASHAQKYF LRQSNPNKKK RRSSLFDVVI SNRTTSRPET PSSPLKTSDK  180
FKKVDRLSLD NYSAASPSFT LIQPGSSIAA SCTGNQNLIL TDLSVNSMTF VPGEAVSSFV  240
KLSIPLSSPP PALPDSPTIA NSDLELSIAP PESHSSLGKI SSGTIRVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148152KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.12e-43MYB_related family protein